always listen to Doug instead of me :)
On Sun, 4 Jan 2015, Douglas Greve wrote:
Can you run
cd /media/sf_Dataset/ADHD200/Processed/mri
mri_nu_correct.mni --debug --n 1 --proto-iters 1000 --distance 50
--no-rescale --i orig.mgz --o orig_nu.mgz |& tee dng.log
and send me dng.log
doug
On 1/4/15 7:56 PM, Muhammad Naveed Iqbal Qureshi wrote:
Dear community,
I execute the following command:
recon-all
-i/media/sf_Dataset/ADHD200/adhd_200/Brown_26001/Brown_26001_1/scans/anat_1-a
nat/resources/NIfTI/files/rest.nii.gz
-subject/media/sf_Dataset/ADHD200/adhd_200/Brown_26001/Brown_26001_1/scans/anat_1-a
nat/resources/NIfTI/files/Processed/ -all
it return with the following error message. Where am I making a
mistake.
Writing to /media/sf_Dataset/ADHD200/Processed/mri/orig.mgz...
mri_add_xform_to_header -c
/media/sf_Dataset/ADHD200/Processed/mri/transforms/talairach.xfm
/media/sf_Dataset/ADHD200/Processed/mri/orig.mgz
/media/sf_Dataset/ADHD200/Processed/mri/orig.mgz
INFO: extension is mgz
#--------------------------------------------
#@# Talairach Mon Jan 5 09:51:46 KST 2015
/media/sf_Dataset/ADHD200/Processed/mri
mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 50
--no-rescale --i orig.mgz --o orig_nu.mgz
Linux localhost.localdomain 2.6.32-431.5.1.el6.x86_64 #1 SMP Wed
Feb 12 00:41:43 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s Processed exited with ERRORS at Mon Jan 5 09:51:54
KST 2015
For more details, see the log file
/media/sf_Dataset/ADHD200/Processed/scripts/recon-all.log
To report a problem, see
http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
[naveed-centos@localhost ~]$
Best Regards,
Muhammad Naveed Iqbal Qureshi
P please don't print this e-mail unless you really need to
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