Hi Ri, The command you provide just register (align) the EPI data with the T1 image. It doesn't actually tell us how you sample your data onto the surface. Presumably you must have used mri_vol2surf (at least implicitly) to use the resultant registration to sample your data onto the surface. What is the exact command you use?
Cheers, Thomas On Tue, Dec 23, 2014 at 7:26 PM, Ritobrato Datta <rida...@mail.med.upenn.edu> wrote: > Hi All, > > For a reviewer, I need the following ASAP: > > Comments from Reviewer: Please provide a brief description of the resampling > method by which volume data were transformed to surface data. Was the data > averaged between the white and pial boundaries? Or was a constant normal > average taken? > > I used bbregister as follows to register the epi image to freesurfer anatomy > > bbregister --s $Subject --bold --mov Functional-FS.nii --init-fsl --reg > FS-register.dat > > Can someone comment on the resampling method as the reviewer asked ? > > Thanks > > Ri > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
