There is not an explicit program to do this. You can re-run mri_surfcluster with a lower threshold and mask to the big cluster to force all the results to be within that cluster. doug
On 11/06/2014 04:29 AM, Sophie Maingault wrote: > Dear FS experst, > > I used the command mri_surfcluster. For one analysis, I obtained 6 > clusters with one huge of 473 cm2 which corresponds to several > "sub-clusters" because it was expanded through a large part of the > cortex (covering several anatomical regions). Is there a way to > separate one apparent cluster in several sub clusters by extracting > several maximum vertices and not only one per cluster ? > > Best, > > *Sophie Maingault –Doctorante/PhD student* > > GIN (Groupe d'Imagerie Neurofonctionnelle) > UMR 5296 –Université de Bordeaux –CNRS/CEA > 146, rue Léo Saignat – Case 71 > 33076 Bordeaux cedex > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
