Hi Ngoaka
no, you don't need to set the origin of the image. Just point recon-all at
a single slice from the correct dicom series (of a highres T1-weighted
scan) with the
-i <full path and file name of dicom slice> -all -s <subject id that you pick>
and you should be good to go
cheers
Bruce
On Tue, 4 Nov 2014, CHONNIKAN JONGKREANGKRAI wrote:
Dear all,
I'm new on FreeSurfer.
I want to calculate cortical thickness, hippocampus volume from MRI images
(obtained from ADNI).
After installation, I tried recon-all. >> Only this process, can I obtain
cortical thickness and hippocampus volume?
And someone told me that I have to set origin of the image of each case
using SPM program.
I want to know that is it necessary?
Thank you for your kind attention
Best Regards,
Ngoak
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