Hi Christina
it's tough to tell from just a single image, but it looks to me like you
are missing a bunch of white matter. Can you tell us more about the scan?
The typical way you would fix this is by setting some thresholds in
mris_make_surfaces using the expert options. Probably max_csf should be
lower. If you upload the subject we will take a look
cheers
Bruce
On
Mon, 3 Nov 2014, Christina Chen wrote:
Hi,
Are there any ways to fix underinclusion of gray matter cortical edges when
the white matter is fine? Attached is a picture.
Thanks,
Christina
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