Hi Marie - Thanks for your response. After sending my email I found the hemisphere average values, but the values at each vertex and in each ROI will be very helpful!
I tried the command you provided in tkmedit and it looks perfect - thanks! But when I try what I think is the corresponding command in freeview: freeview -v <SUBJ>/mri/brainmask.mgz <SUBJ>/mri/T1.mgz -f <SUBJ>/surf/lh.pial-outer-smoothed the images don't align (see attached). Am I doing something wrong? ~ Maria
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