I would use mri_vol2vol to map the PET into the anatomical space, then use mri_segstats to compute the statistics. doug
On 10/22/2014 02:50 PM, Makaretz, Sara Johanna wrote: > Hi, > I have a PET volume that is registered to a recon, then projected to the > surface via vol2surf. I would like to pull stats for the PET using aparc > regions. Should I use mri_annotation2label, then pull stats for each label? > Or is there something similar to mri_segstats, ie. --annot lh.aparc.annot > --in pet_surf.mgz --ctab-default --sum stats.table ? > Thank you for your help! > Sara > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
