there are 3 args you have to give it: --cache-dir, --cache-label, and --cache (and the --glmdir as well) On 10/21/2014 12:52 PM, Thomas DeRamus wrote: > Those seem to be giving the "must specify sim" error as well I'm afraid. > > mri_glmfit-sim --glmdir rh.ALESocial__agevolume.glmdir --cache-label > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > ERROR: must spec --sim > > /media/rkbatch/gyrification $ mri_glmfit-sim --glmdir > rh.ALESocial__agevolume.glmdir --cache-dir > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/ --cache-label > rh.Socialbrain > ERROR: must spec --sim > > /media/rkbatch/gyrification $ mri_glmfit-sim --glmdir > rh.ALESocial__agevolume.glmdir --cache-label rh.Socialbrain > ERROR: must spec --sim > > Also is cache-label its own flag or does it need to include the > cache-dir or something else? > > On Tue, Oct 21, 2014 at 11:45 AM, Douglas N Greve > <gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> wrote: > > sorry it is --cache-label > > On 10/21/2014 12:40 PM, Thomas DeRamus wrote: > > And if you remove it it just goes back to the "must specify sim" > error. > > > > On Tue, Oct 21, 2014 at 11:39 AM, Thomas DeRamus > <tpdera...@gmail.com <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>> wrote: > > > > It says the label flag is unrecognized. > > > > mri_glmfit-sim --glmdir rh.ALESocial__agevolume.glmdir > --cache-dir > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/ --label > > rh.Socialbrain > > ERROR: Flag --label unrecognized. > > --glmdir rh.ALESocial__agevolume.glmdir --cache-dir > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/ --label > > rh.Socialbrain > > > > > > On Tue, Oct 21, 2014 at 11:30 AM, Douglas N Greve > > <gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> wrote: > > > > I think you need to pass it > > --cache-dir > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor --label > > rh.SocialBrainMask > > > > doug > > > > On 10/21/2014 10:31 AM, Thomas DeRamus wrote: > > > How do I change the path so that it's reading from the > label > > I made > > > (Socialbrain) in lieu of the cortex? > > > > > > On Mon, Oct 20, 2014 at 5:42 PM, Thomas DeRamus > > <tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>>> > > wrote: > > > > > > That one gives the following error: > > > > > > mri_glmfit-sim --glmdir rh.ALESocial__agevolume.glmdir > > --cache-dir > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > > > --cache 2 abs > > > cmdline mri_glmfit --y > > rh.diagnosisxageICVslopetest.volume.10.mgh > > > --fsgd SBM_glmVolumeNOGENDER.fsgd dods --C > > > diagnosisnonlGIICmeas.mtx --C > agesxdiagnosisnonlGI.mtx --C > > > diagnosisnonxagexICmeas.mtx --C > > ICmeasurexdiagnosisnonlGI.mtx > > > --surf fsaverage rh --label > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > --glmdir rh.ALESocial__agevolume.glmdir > > > SURFACE: fsaverage rh > > > log file is > > rh.ALESocial__agevolume.glmdir/cache.mri_glmfit-sim.log > > > > > > cd /media/rkbatch/gyrification > > > /usr/local/freesurfer/bin/mri_glmfit-sim > > > --glmdir rh.ALESocial__agevolume.glmdir --cache-dir > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > > > --cache 2 abs > > > > > > $Id: mri_glmfit-sim,v 1.36.2.5 2012/10/01 22:31:37 > greve > > Exp $ > > > Mon Oct 20 17:39:34 CDT 2014 > > > Linux waffle 3.2.0-23-generic #36-Ubuntu SMP Tue > Apr 10 > > 20:39:51 > > > UTC 2012 x86_64 x86_64 x86_64 GNU/Linux > > > tderamus > > > setenv SUBJECTS_DIR /media/rkbatch/gyrification > > > FREESURFER_HOME /usr/local/freesurfer > > > > > > Original mri_glmfit command line: > > > cmdline mri_glmfit --y > > rh.diagnosisxageICVslopetest.volume.10.mgh > > > --fsgd SBM_glmVolumeNOGENDER.fsgd dods --C > > > diagnosisnonlGIICmeas.mtx --C > agesxdiagnosisnonlGI.mtx --C > > > diagnosisnonxagexICmeas.mtx --C > > ICmeasurexdiagnosisnonlGI.mtx > > > --surf fsaverage rh --label > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > --glmdir rh.ALESocial__agevolume.glmdir > > > > > > DoSim = 0 > > > UseCache = 1 > > > DoPoll = 0 > > > DoPBSubmit = 0 > > > DoBackground = 0 > > > DiagCluster = 0 > > > gd2mtx = dods > > > fwhm = 14.594354 > > > ERROR: cannot find > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain//fsaverage/rh/cortex/fwhm15/abs/th20/mc-z.csd > > > > > > > > > It looks like its still trying to use the cached > > monte-carlo from > > > the fsaverage rather than the one for the label. > Am I using > > > --cache-dir correctly? > > > > > > On Mon, Oct 20, 2014 at 5:34 PM, Douglas N Greve > > > <gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>> wrote: > > > > > > you need to add --cache threshold sign (and > don't use > > > --sim-sign or --sim) > > > > > > On 10/20/2014 05:42 PM, Thomas DeRamus wrote: > > > > It does not I'm afraid. The error I get says the > > following: > > > > > > > > mri_glmfit-sim --glmdir > rh.ALESocial__agevolume.glmdir > > > --cache-dir > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > > > > --sim-sign abs --2spaces > > > > ERROR: must spec --sim > > > > > > > > Does the same if I remove the --sim-sign abs > as well. > > > > > > > > On Mon, Oct 20, 2014 at 3:15 PM, Douglas N Greve > > > > <gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>>> wrote: > > > > > > > > > > > > You should not spec --sim. If you do > not, does > > it work? > > > > doug > > > > > > > > On 10/20/2014 04:10 PM, Thomas DeRamus > wrote: > > > > > I guess the better term would be to > say that > > I'm not > > > sure if the > > > > > cluster correction is using the > monte-carlo > > I made > > > from the > > > > label file > > > > > correctly. > > > > > > > > > > I see on the wiki and in the mailing list > > you can use > > > a different > > > > > directory and then spec that folder using > > > mri_glmfit-sim with the > > > > > --cache-dir flag. When I run it like > that, I > > get this > > > output > > > > > mri_glmfit-sim --glmdir > > rh.ALESocial__agevolume.glmdir > > > --cache-dir > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > > > > > --cwp 0.05 --2spaces --sim > > > > > ERROR: flag --sim requires four arguments > > > > > > > > > > When I specify the sim (which I'm not > sure I > > need > > > since I ran the > > > > > simulation already) and sim-sign abs, and > > run either > > > of the > > > > following, > > > > > I get these as outputs: > > > > > > > > > > mri_glmfit-sim --glmdir > > rh.ALESocial__agevolume.glmdir > > > --sim mc-z > > > > > 10000 2 > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > > > > > --sim-sign abs --2spacescmdline > mri_glmfit --y > > > > > rh.diagnosisxageICVslopetest.volume.10.mgh > > --fsgd > > > > > SBM_glmVolumeNOGENDER.fsgd dods --C > > > diagnosisnonlGIICmeas.mtx --C > > > > > agesxdiagnosisnonlGI.mtx --C > > > diagnosisnonxagexICmeas.mtx --C > > > > > ICmeasurexdiagnosisnonlGI.mtx --surf > > fsaverage rh --label > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > > --glmdir rh.ALESocial__agevolume.glmdir > > > > > SURFACE: fsaverage rh > > > > > log file is > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > cd /media/rkbatch/gyrification > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > /usr/local/freesurfer/bin/mri_glmfit-sim > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > --glmdir rh.ALESocial__agevolume.glmdir > > --sim mc-z 10000 2 > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/ > > > > > --sim-sign abs --2spaces > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > $Id: mri_glmfit-sim,v 1.36.2.5 2012/10/01 > > 22:31:37 > > > greve Exp $ > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > Mon Oct 20 15:06:19 CDT 2014 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > Linux waffle 3.2.0-23-generic > #36-Ubuntu SMP > > Tue Apr > > > 10 20:39:51 UTC > > > > > 2012 x86_64 x86_64 x86_64 GNU/Linux > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > tderamus > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > setenv SUBJECTS_DIR > /media/rkbatch/gyrification > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > FREESURFER_HOME /usr/local/freesurfer > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > Original mri_glmfit command line: > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > cmdline mri_glmfit --y > > > rh.diagnosisxageICVslopetest.volume.10.mgh > > > > > --fsgd SBM_glmVolumeNOGENDER.fsgd dods --C > > > diagnosisnonlGIICmeas.mtx > > > > > --C agesxdiagnosisnonlGI.mtx --C > > > diagnosisnonxagexICmeas.mtx --C > > > > > ICmeasurexdiagnosisnonlGI.mtx --surf > > fsaverage rh --label > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > > --glmdir rh.ALESocial__agevolume.glmdir > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoSim = 1 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > UseCache = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoPoll = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoPBSubmit = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoBackground = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DiagCluster = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > gd2mtx = dods > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > fwhm = 14.594354 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > nSimPerJob = 10000 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > 1/1 Mon Oct 20 15:06:19 CDT 2014 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > mri_glmfit --y > > > > > > > > > > > > > > > /media/rkbatch/gyrification/rh.diagnosisxageICVslopetest.volume.10.mgh > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20978/agesxdiagnosisnonlGI.mtx > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20978/diagnosisnonlGIICmeas.mtx > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20978/diagnosisnonxagexICmeas.mtx > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20978/ICmeasurexdiagnosisnonlGI.mtx > > > > > --mask > > rh.ALESocial__agevolume.glmdir/mask.mgh --sim > > > mc-z 10000 2 > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/csd//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.j001 > > > > > --sim-sign abs --fwhm 14.594354 --fsgd > > > > > rh.ALESocial__agevolume.glmdir/y.fsgd dods > > --label > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > --surf > > > > > fsaverage rh white > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > INFO: ignoring tag Creator > > > > > INFO: ignoring tag SUBJECTS_DIR > > > > > INFO: ignoring tag SynthSeed > > > > > MatrixMultiply: m1 is null! > > > > > > > > > > No such file or directory > > > > > simbase > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/csd//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/.j001 > > > > > FWHM = 14.594354 > > > > > gdfReadHeader: reading > > > rh.ALESocial__agevolume.glmdir/y.fsgd > > > > > INFO: NOT demeaning continuous variables > > > > > Continuous Variable Means (all subjects) > > > > > 0 Age 18.4329 6.76585 > > > > > 1 tICV 1.67822e+06 146117 > > > > > Class Means of each Continuous Variable > > > > > 1 CTRL 18.2315 1690205.3333 > > > > > 2 ASD 18.6525 1665138.7273 > > > > > > > > > > mri_glmfit-sim --glmdir > > rh.ALESocial__agevolume.glmdir > > > --sim mc-z > > > > > 10000 2 > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd > > > > > --sim-sign abs --2spaces > > > > > cmdline mri_glmfit --y > > > rh.diagnosisxageICVslopetest.volume.10.mgh > > > > > --fsgd SBM_glmVolumeNOGENDER.fsgd dods --C > > > diagnosisnonlGIICmeas.mtx > > > > > --C agesxdiagnosisnonlGI.mtx --C > > > diagnosisnonxagexICmeas.mtx --C > > > > > ICmeasurexdiagnosisnonlGI.mtx --surf > > fsaverage rh --label > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > > --glmdir rh.ALESocial__agevolume.glmdir > > > > > SURFACE: fsaverage rh > > > > > log file is > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > cd /media/rkbatch/gyrification > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > /usr/local/freesurfer/bin/mri_glmfit-sim > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > --glmdir rh.ALESocial__agevolume.glmdir > > --sim mc-z 10000 2 > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd > > > > > --sim-sign abs --2spaces > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > $Id: mri_glmfit-sim,v 1.36.2.5 2012/10/01 > > 22:31:37 > > > greve Exp $ > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > Mon Oct 20 15:04:37 CDT 2014 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > Linux waffle 3.2.0-23-generic > #36-Ubuntu SMP > > Tue Apr > > > 10 20:39:51 UTC > > > > > 2012 x86_64 x86_64 x86_64 GNU/Linux > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > tderamus > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > setenv SUBJECTS_DIR > /media/rkbatch/gyrification > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > FREESURFER_HOME /usr/local/freesurfer > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > Original mri_glmfit command line: > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > cmdline mri_glmfit --y > > > rh.diagnosisxageICVslopetest.volume.10.mgh > > > > > --fsgd SBM_glmVolumeNOGENDER.fsgd dods --C > > > diagnosisnonlGIICmeas.mtx > > > > > --C agesxdiagnosisnonlGI.mtx --C > > > diagnosisnonxagexICmeas.mtx --C > > > > > ICmeasurexdiagnosisnonlGI.mtx --surf > > fsaverage rh --label > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > > --glmdir rh.ALESocial__agevolume.glmdir > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoSim = 1 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > UseCache = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoPoll = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoPBSubmit = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DoBackground = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > DiagCluster = 0 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > gd2mtx = dods > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > fwhm = 14.594354 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > nSimPerJob = 10000 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > 1/1 Mon Oct 20 15:04:37 CDT 2014 > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > mri_glmfit --y > > > > > > > > > > > > > > > /media/rkbatch/gyrification/rh.diagnosisxageICVslopetest.volume.10.mgh > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20856/agesxdiagnosisnonlGI.mtx > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20856/diagnosisnonlGIICmeas.mtx > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20856/diagnosisnonxagexICmeas.mtx > > > > > --C > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/tmp.mri_glmfit-sim-20856/ICmeasurexdiagnosisnonlGI.mtx > > > > > --mask > > rh.ALESocial__agevolume.glmdir/mask.mgh --sim > > > mc-z 10000 2 > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/csd//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.j001 > > > > > --sim-sign abs --fwhm 14.594354 --fsgd > > > > > rh.ALESocial__agevolume.glmdir/y.fsgd dods > > --label > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > --surf > > > > > fsaverage rh white > > > > > tee: > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.mri_glmfit-sim.log: > > > > > No such file or directory > > > > > INFO: ignoring tag Creator > > > > > INFO: ignoring tag SUBJECTS_DIR > > > > > INFO: ignoring tag SynthSeed > > > > > MatrixMultiply: m1 is null! > > > > > > > > > > No such file or directory > > > > > simbase > > > > > > > > > > > > > > > > rh.ALESocial__agevolume.glmdir/csd//media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain/fwhm13/abs/th20/mc-z.csd.j001 > > > > > FWHM = 14.594354 > > > > > gdfReadHeader: reading > > > rh.ALESocial__agevolume.glmdir/y.fsgd > > > > > INFO: NOT demeaning continuous variables > > > > > Continuous Variable Means (all subjects) > > > > > 0 Age 18.4329 6.76585 > > > > > 1 tICV 1.67822e+06 146117 > > > > > Class Means of each Continuous Variable > > > > > 1 CTRL 18.2315 1690205.3333 > > > > > 2 ASD 18.6525 1665138.7273 > > > > > > > > > > Since the directory and flags are > returning > > errors, > > > I'm assuming I'm > > > > > just inputing everything incorrectly > or its > > a path > > > issue. Does > > > > that help? > > > > > > > > > > On Mon, Oct 20, 2014 at 2:53 PM, > Douglas N Greve > > > > > <gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>> > > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>>>> wrote: > > > > > > > > > > > > > > > what do you mean it has trouble > > understanding? > > > What is your > > > > > command line > > > > > and terminal output. Also, are you > > following these > > > instructions? > > > > > > > > > > > > > > https://surfer.nmr.mgh.harvard.edu/fswiki/BuildYourOwnMonteCarlo > > > > > > > > > > > > > > > On 10/20/2014 03:50 PM, Thomas DeRamus > > wrote: > > > > > > Dear Freesurfer Experts, > > > > > > > > > > > > I have a label file of a number of > > ROI's I've > > > made based > > > > on a mask. > > > > > > I'm trying to get an idea of what > > cluster are > > > significant > > > > within a > > > > > > focused region of the label file. > > > > > > > > > > > > To make the correction a little less > > sever, I > > > pre-computed > > > > some > > > > > > monte-carlo values using mri_mcsim > > > > > > > > > > > > mri_mcsim --o > > > > > > > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/rh/Socialbrain > > > > > > --base mc-z --surface fsaverage rh > > --nreps 10000 > > > --label > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > > > > > > > > > mri_mcsim --o > > > > > > > > > > $SUBJECTS_DIR/fsaverage/mult-comp-cor/fsaverage/lh/Socialbrain > > > > > --base > > > > > > mc-z --surface fsaverage lh --nreps > > 10000 --label > > > > > > > > $SUBJECTS_DIR/fsaverage/label/lh.SocialBrainMask > > > > > > > > > > > > Respectively for each surface (the > > labels are > > > different on > > > > each > > > > > > hemisphere). > > > > > > > > > > > > I've run mri_glmfit and have the > > uncorrected > > > outputs and > > > > results > > > > > > (there are actually 6 of these, one > > for volume, > > > thickness, and > > > > > surface > > > > > > area for each hemi): > > > > > > > > > > > > mri_glmfit --y > > > > > rh.diagnosisxagexrightThickslopetest.thickness.10.mgh > > > > > > --fsgd > SBM_glmRightthickNOGENDER.fsgd > > dods --C > > > > > > diagnosisnonlGIICmeas.mtx --C > > > agesxdiagnosisnonlGI.mtx --C > > > > > > diagnosisnonxagexICmeas.mtx --C > > > > ICmeasurexdiagnosisnonlGI.mtx --surf > > > > > > fsaverage rh --label > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/label/rh.SocialBrainMask > > > > > > --glmdir > rh.ALESocial__agethickness.glmdir > > > > > > > > > > > > But when I try to do the > > mri_glmfit-sim, I am having > > > > trouble getting > > > > > > it to read in the corrected csd > file. > > > > > > > > > > > > I'm wanting to run it at cwp of > 0.05 at a > > > threshold of 2 > > > > (0.01), > > > > > with > > > > > > a correction for two hemispheres. > > However, when > > > I try to > > > > run it with > > > > > > --cache-dir > > > > > > > > > > > > > > > > > > > > > > /media/rkbatch/gyrification/fsaverage/mult-comp-cor/fsaverage/lh/Socialbrain > > > > > > , it has trouble understanding the > > --cwp .05, > > > --2spaces > > > > and 2 abs > > > > > > (after cache dir) flags. > Additionally, > > it wants > > > a --sim and > > > > > --sim-sign > > > > > > value like it wants to compute a > > monte-carlo > > > from scratch. > > > > > > > > > > > > Could I get an example on how > best to > > direct it > > > to the > > > > > simulation I've > > > > > > run on it? > > > > > > > > > > > > Thanks much. > > > > > > -Thomas > > > > > > > > > > > > > > > > > > -- > > > > > > *Thomas DeRamus* > > > > > > UAB Department of Psychology, > Behavioral > > > Neuroscience > > > > > > Graduate Research Trainee > > > > > > Civitan International Research > Center > > > > > > 1719 6th Ave S, Suite 235J, > > Birmingham, AL 35233 > > > > > > _Phone_: 205-934-0971 > > <tel:205-934-0971> <tel:205-934-0971 <tel:205-934-0971>> > > > <tel:205-934-0971 <tel:205-934-0971> > > <tel:205-934-0971 <tel:205-934-0971>>> <tel:205-934-0971 > > <tel:205-934-0971> > > > <tel:205-934-0971 <tel:205-934-0971>> > > > > <tel:205-934-0971 <tel:205-934-0971> > > <tel:205-934-0971 <tel:205-934-0971>>>> <tel:205-934-0971 > > <tel:205-934-0971> > > > <tel:205-934-0971 <tel:205-934-0971>> > > <tel:205-934-0971 <tel:205-934-0971> <tel:205-934-0971 > > <tel:205-934-0971>>> > > > > > <tel:205-934-0971 <tel:205-934-0971> > > > <tel:205-934-0971 <tel:205-934-0971>>>> _Email:_ > > > tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>> > > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>>> > > > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>>>> > > > > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>>> > > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>>>>>, > > > > > faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>> > > > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>>>> > > > > > > > > > > > > > > > > > > > > _______________________________________________ > > > > > > Freesurfer mailing list > > > > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > > > > > > > > > > >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > > -- > > > > > Douglas N. Greve, Ph.D. > > > > > MGH-NMR Center > > > > > gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>> > > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>>> > > > > > Phone Number:617-724-2358 > > <tel:617-724-2358> <tel:617-724-2358 > > > <tel:617-724-2358>> > > > > <tel:617-724-2358 <tel:617-724-2358> > > <tel:617-724-2358 > > > <tel:617-724-2358>>> > > > > > Fax: 617-726-7422 <tel:617-726-7422> > > > <tel:617-726-7422 <tel:617-726-7422>> > <tel:617-726-7422 > > > <tel:617-726-7422> > > > > <tel:617-726-7422 <tel:617-726-7422>>> > > > > > > > > > > Bugs: > > > surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > > > > > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > > FileDrop: > > https://gate.nmr.mgh.harvard.edu/filedrop2 > > > > > > > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > > > > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > > > > > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > Outgoing: > > > > > > > > > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > > > > > > > > > > _______________________________________________ > > > > > Freesurfer mailing list > > > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>>>> > > > > > > > > > > >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > > > > > > > The information in this e-mail is > > intended only > > > for the > > > > person to > > > > > whom it is > > > > > addressed. If you believe this e-mail > > was sent to > > > you in > > > > error and > > > > > the e-mail > > > > > contains patient information, please > > contact the > > > Partners > > > > > Compliance HelpLine at > > > > > http://www.partners.org/complianceline > . If > > the e-mail > > > was sent to > > > > > you in error > > > > > but does not contain patient > > information, please > > > contact the > > > > > sender and properly > > > > > dispose of the e-mail. > > > > > > > > > > > > > > > > > > > > > > > > > -- > > > > > *Thomas DeRamus* > > > > > UAB Department of Psychology, Behavioral > > Neuroscience > > > > > Graduate Research Trainee > > > > > Civitan International Research Center > > > > > 1719 6th Ave S, Suite 235J, > Birmingham, AL 35233 > > > > > _Phone_: 205-934-0971 <tel:205-934-0971> > > > <tel:205-934-0971 <tel:205-934-0971>> _Email:_ > > > > tpdera...@gmail.com > <mailto:tpdera...@gmail.com> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>>> > > > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>>>>, > > > > faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>>> > > > > > > > > > > > > > > > > _______________________________________________ > > > > > Freesurfer mailing list > > > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > > > > > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > -- > > > > Douglas N. Greve, Ph.D. > > > > MGH-NMR Center > > > > gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>> > > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>>> > > > > Phone Number: 617-724-2358 > <tel:617-724-2358> > > > <tel:617-724-2358 <tel:617-724-2358>> > > > > Fax: 617-726-7422 <tel:617-726-7422> > > <tel:617-726-7422 > > > <tel:617-726-7422>> > > > > > > > > Bugs: > > surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > FileDrop: > > https://gate.nmr.mgh.harvard.edu/filedrop2 > > > > > > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > > > > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > Outgoing: > > > > > > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > > > > > > > _______________________________________________ > > > > Freesurfer mailing list > > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>>> > > > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > > > > > > > > > > > > -- > > > > *Thomas DeRamus* > > > > UAB Department of Psychology, Behavioral > Neuroscience > > > > Graduate Research Trainee > > > > Civitan International Research Center > > > > 1719 6th Ave S, Suite 235J, Birmingham, AL 35233 > > > > _Phone_: 205-934-0971 <tel:205-934-0971> > _Email:_ > > > tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>> > > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>> <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>>>, > > > faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > <mailto:faus...@uab.edu > <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>>> > > > > > > > > > > > > _______________________________________________ > > > > Freesurfer mailing list > > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > -- > > > Douglas N. Greve, Ph.D. > > > MGH-NMR Center > > > gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu> > > <mailto:gr...@nmr.mgh.harvard.edu > <mailto:gr...@nmr.mgh.harvard.edu>>> > > > Phone Number: 617-724-2358 <tel:617-724-2358> > > > Fax: 617-726-7422 > > > > > > Bugs: > surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > > FileDrop: > https://gate.nmr.mgh.harvard.edu/filedrop2 > > > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > Outgoing: > > > > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > > > > > _______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>>> > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > > > > > > > -- > > > *Thomas DeRamus* > > > UAB Department of Psychology, Behavioral Neuroscience > > > Graduate Research Trainee > > > Civitan International Research Center > > > 1719 6th Ave S, Suite 235J, Birmingham, AL 35233 > > > _Phone_: 205-934-0971 _Email:_ tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com > <mailto:tpdera...@gmail.com>>>, faus...@uab.edu > <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > > > > > > > > > > > > > -- > > > *Thomas DeRamus* > > > UAB Department of Psychology, Behavioral Neuroscience > > > Graduate Research Trainee > > > Civitan International Research Center > > > 1719 6th Ave S, Suite 235J, Birmingham, AL 35233 > > > _Phone_: 205-934-0971 _Email:_ tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>> > > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com> > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>>, > > faus...@uab.edu <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > <mailto:faus...@uab.edu <mailto:faus...@uab.edu> > <mailto:faus...@uab.edu <mailto:faus...@uab.edu>>> > > > > > > > > > _______________________________________________ > > > Freesurfer mailing list > > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > -- > > Douglas N. Greve, Ph.D. > > MGH-NMR Center > > gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu>> > > Phone Number: 617-724-2358 > > Fax: 617-726-7422 > > > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > > Outgoing: > > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu>> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > > -- > > *Thomas DeRamus* > > UAB Department of Psychology, Behavioral Neuroscience > > Graduate Research Trainee > > Civitan International Research Center > > 1719 6th Ave S, Suite 235J, Birmingham, AL 35233 > > _Phone_: 205-934-0971 _Email:_ tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>, > faus...@uab.edu <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > > > > > > > > > -- > > *Thomas DeRamus* > > UAB Department of Psychology, Behavioral Neuroscience > > Graduate Research Trainee > > Civitan International Research Center > > 1719 6th Ave S, Suite 235J, Birmingham, AL 35233 > > _Phone_: 205-934-0971 _Email:_ tpdera...@gmail.com > <mailto:tpdera...@gmail.com> > > <mailto:tpdera...@gmail.com <mailto:tpdera...@gmail.com>>, > faus...@uab.edu <mailto:faus...@uab.edu> <mailto:faus...@uab.edu > <mailto:faus...@uab.edu>> > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > <mailto:Freesurfer@nmr.mgh.harvard.edu> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu <mailto:gr...@nmr.mgh.harvard.edu> > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > Outgoing: > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > -- > *Thomas DeRamus* > UAB Department of Psychology, Behavioral Neuroscience > Graduate Research Trainee > Civitan International Research Center > 1719 6th Ave S, Suite 235J, Birmingham, AL 35233 > _Phone_: 205-934-0971 _Email:_ tpdera...@gmail.com > <mailto:tpdera...@gmail.com>, faus...@uab.edu <mailto:faus...@uab.edu> > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
