So, did it generate the error when you loaded the table or when you hit analyze? List the steps and buttons that produce this error. doug
On 07/31/2014 05:20 PM, McLaughlin, Katie wrote: > Hi Doug, > > I'm using 5.3. > > This error was generated when I had more variables in the model, so I used > the option within qdec to remove variables from the data table to see if that > had any effect (i.e., deleted everything except one categorical variable). > Still got the error you see below. > > Thanks, > Kate > > ________________________________________ > From: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve > [gr...@nmr.mgh.harvard.edu] > Sent: Thursday, July 31, 2014 5:14 PM > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] GLM error in QDEC > > What version of FS are you using? When I load that file in 5.3 qdec, it > creates several discrete classes, see below > doug > > > 40 1179 c 17.514000 0.944336 f 12.000000 14.000000 0.000000 > -7.500000 0.452381 1565300.000000 15300.000000 > 41 1180 c 17.330600 0.760936 f 1.000000 0.000000 0.000000 -18.500000 > -13.547619 1452200.000000 -97800.000000 > 42 1181 c 16.188900 -0.380764 f 10.000000 6.000000 0.000000 > -9.500000 -7.547619 1489390.000000 -60610.000000 > 1 maltreatment discrete 2 > 1 c > 2 m > 2 age continuous 0 > 3 age_demean continuous 0 > 4 sex discrete 2 > 1 m > 2 f > 5 internalizing continuous 0 > 6 externalizing continuous 0 > 7 hs_less continuous 0 > 8 internal_demean continuous 0 > 9 external_demean continuous 0 > 10 ICV continuous 0 > 11 ICV_demean continuous 0 > Continuous Factors: Mean: StdDev: > ------------------- ----- ------- > age 16.570 1.410 > age_demean -0.000 1.410 > internalizing 19.500 12.769 > externalizing 13.548 9.759 > hs_less 0.119 0.328 > internal_demean 0.000 12.769 > external_demean 0.000 9.759 > ICV 1554609.048 168177.248 > ICV_demean 4609.048 168177.248 > > Number of subjects: 42 > Number of factors: 11 (2 discrete, 9 continuous) > Number of classes: 4 > Number of regressors: 40 > > > > > On 07/31/2014 02:27 PM, McLaughlin, Katie wrote: >> Hi Doug et al, >> >> I'm trying to run an analysis in QDEC and continue to get an error >> that says that the QDEC GLM design creates 0 factors. >> >> I'm attaching my data table here as well as the output of QDEC. I've >> tried deleting all variables in my data file other than one and >> testing just that comparison, but no luck. >> >> Any thoughts are much appreciated. >> >> Thanks, >> Kate >> >> SUBJECTS_DIR is >> '/net/rc-fs-nfs/ifs/data/Shares/DMC-Sheridan2/projects/SAS/FreeSurfer/FS_5.3' >> Input table: >> /neuro/labs/sheridanlab/projects/SAS/FreeSurfer/FS_5.3/qdec/qdec.table.maltreatment.dat >> Subj#, SubjID, Data... >> 1 1009 c >> 2 1014 c >> 3 1032 c >> 4 1034 c >> 5 1041 m >> 6 1043 m >> 7 1047 c >> 8 1058 m >> 9 1077 c >> 10 1094 m >> 11 1096 c >> 12 1097 c >> 13 1099 c >> 14 1100 m >> 15 1114 m >> 16 1119 m >> 17 1123 m >> 18 1125 c >> 19 1126 c >> 20 1128 c >> 21 1134 c >> 22 1137 m >> 23 1139 m >> 24 1142 m >> 25 1143 m >> 26 1153 m >> 27 1154 m >> 28 1157 c >> 29 1158 m >> 30 1163 m >> 31 1165 m >> 32 1166 m >> 33 1167 m >> 34 1171 c >> 35 1173 c >> 36 1175 c >> 37 1176 c >> 38 1177 m >> 39 1178 m >> 40 1179 c >> 41 1180 c >> 42 1181 c >> 1 maltreatment discrete 2 >> 1 c >> 2 m >> Continuous Factors: Mean: StdDev: >> ------------------- ----- ------- >> >> Number of subjects: 42 >> Number of factors: 1 (1 discrete, 0 continuous) >> Number of classes: 2 >> Number of regressors: 2 >> ============================================================ >> ERROR: QdecGlmDesign::Create: zero factors! >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
