The slice is displayed in native (scanner) coordinates so the talairach y can change. This is probably the case even for fsaverage since that is in MNI305 space doug
On 06/30/2014 01:09 PM, DeCross, Stephanie N. wrote: > Hi, > > In FreeSurfer 5.3, when I click around in a coronal view slice, the > Talairach y coordinate changes (in both the cursor column and the > mouse column). This doesn’t make sense - it’s the same coronal slice, > so shouldn’t anywhere on that same plane still have the same y > coordinate? When I take a screenshot of the brain map and report the y > coordinate, is there a standardized procedure for where in the slice I > should click to take that coordinate to report? > > Thanks, > Stephanie > > > Stephanie N. DeCross > Clinical Research Coordinator > Psychiatric Neuroimaging Research Program > Martinos Center for Biomedical Imaging > Massachusetts General Hospital > 149 13th Street, Charlestown, MA 02129 > Phone: 617-724-3283 > Fax: 617-726-4078 > > > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
