Hi Freesurfer Team, I'd like to view a multicolored quilt of individual cortical icosahedron subdivisions. I have labels for these subdivisions stored in the SUBJECT/label folder I can also batch load all these labels and view them in Freeview but am not sure how to randomize their colors for a multicolored appearance.
I looked up how to use annotation files and tried to amalgate all left cortical labels in the SUBJECT/label/ folder as below: - cd $SUBJECTS_DIR/$SUBJECT/label - mris_label2annot --s $SUBJECT --h lh --a leftall.annot But it asks for a color table file - it seems like editing the Freesurfer color table file will be quite involved. I have all the labels data and vertices in a w-file - can I use it to somehow create the colortable that I need, or the annotation file itself? Is this the correct way for my goal? Thank you. Best Regards Pavitra _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
