Dear all,
I want to get the measurements of meancurvature, thickness, white matter
volume and gray matter volume based on Desikan-Killiay Atlas.
I would like to learn whether the commands I used to get them are the
correct ones (in terms of content) & for Desikan Killiany atlas?

*For meancurv: *
aparcstats2table --hemi lh --subjects S1 S2 S3 --parc aparc --meas meancurv
-t lh.parc.meancurv.txt

*​For thickness:*
aparcstats2table --hemi rh --subjects S1 S2 S3 --parc aparc --meas meancurv
-t rh.parc.meancurv.txt

*For WM volume:*
asegstats2table --all-segs --subjects S1 S2 S3 \-t table.wmparc.txt -d
space --stats wmparc.stats​

*​For GM volume:*
aparcstats2table --subjects S1 S2 S3 --hemi lh --meas volume --parc=aparc
--tablefile aparc_lh_volume_table.txt

​Thanks in advance,
​
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to