Can you email me the file? > On Apr 29, 2014, at 10:27 PM, Virendra Mishra > <virendra.mis...@utsouthwestern.edu> wrote: > > Hi Bruce, > > I tried read_surf. There is a line in read_surf.m "magic = > freesurfer_fread3("name of the surface_file")" The number returned into magic > does not match any of the predefined numbers for quad or tri type of file and > hence it throws an error for vertices because vertices get assigned inside > the if loop that checks for one of the predefined magic number. Any help to > solve this will be very helpful. > > Thank you, > > Sincerely, > > Virendra > > ________________________________________ > From: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl > [fis...@nmr.mgh.harvard.edu] > Sent: Tuesday, April 29, 2014 8:52 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] reading ?h.smoothwm.nofix > > Hi Virendra > Is that our function? I haven't heard of it. Have you tris read_surf? > Bruce > >> On Apr 29, 2014, at 4:16 PM, Virendra Mishra >> <virendra.mis...@utsouthwestern.edu> wrote: >> >> Hello Bruce, >> >> Thank you for the quick reply. Essentially, I want to use >> find_corresponding_center_FSformat matlab command with ?h.smoothwm.nofix >> surface file which I believe calls freesurfer_fread3() file and throws an >> error "Unknown magic number in surface file ?h.smoothwm.nofix. How do I get >> that matlab command to run with ?h.smoothwm.nofix surface file? >> >> Thank you for your help. >> >> Sincerely, >> >> Virendra. >> >> -----Original Message----- >> From: freesurfer-boun...@nmr.mgh.harvard.edu >> [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Bruce Fischl >> Sent: Tuesday, April 29, 2014 3:11 PM >> To: Freesurfer support list >> Subject: Re: [Freesurfer] reading ?h.smoothwm.nofix >> >> Hi Virendra >> >> I think you can use read_surf.m for any of the binary (not named *.asc) >> surfaces. >> >> cheers >> Bruce >> >>> On Tue, 29 Apr 2014, Virendra Mishra wrote: >>> >>> >>> Hello all, >>> >>> >>> >>> Is there a way to read ?h.smoothwm.nofix using freesurfer_fread3() >>> command in matlab? The question that I want to ask really is >>> ?h.smoothwm.nofix should essentially have the same file format as >>> ?h.pial (but I may be wrong) because ?h.*.pial.asc and ?h.*.nofix.asc >>> both have vertices and faces information and I can read ?h.pial using >>> freesurfer_fread3() command. Can anybody help me to read the >>> ?h.smoothwm.nofix file using freesurfer_fread3() command? >>> >>> >>> >>> Thank you for any help. >>> >>> >>> >>> Sincerely, >>> >>> >>> >>> Virendra. >>> >>> >>> ______________________________________________________________________ >>> ______ >>> >>> UT Southwestern Medical Center >>> The future of medicine, today. >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >
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