Hi, I have posted a question about the error while using recon-all command with -use–gpu option on a CentOS 6 machine a while back.
CUDA Error in file 'mriconvolve_cuda.cu' on line 945 : unload of CUDA runtime fa iled. Abort (core dumped) ERROR: mri_ca_register with non-zero status 134 The problem apparently came from this command mri_ca_register_cuda -nobigventricles -T transforms/talairach.lta -align-after -mask brainmask.mgz norm.mgz /opt/freesurfer/average/RB_all_2008-03-26.gca transforms/talairach.m3z We are wondering if it was OK to change the recon-all script so that we would enable OpenMP for this mri_ca_register command but use GPU for the rest of recon-all script? That is, we would replace line 2273 in recon-all from if($UseCuda) set cmd = (mri_ca_register_cuda) To if($UseCuda) set cmd = (mri_ca_register) So, with the –openmp option, this command will run with multiple cores. By not using GPU for this command, we can avoid the CUDA Error message. However, we are wondering if it's OK that we combined both -use–gnu and –openmp? Could you help us out? -- Kevin Tran, Contractor UNIX System Administrator The National Institutes of Health NIMH, Laboratory of Brain and Cognition 10 Center Drive, Room 4C215 Bethesda MD 20892-1366 kevint...@mail.nih.gov _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
