update: the lack of libnetcdf eventually makes it fail. i found a libnetcdf.so.7 on the cluster and soft linked it to libnetcdf.so.6 and added the path to LD_LIBRARY_PATH.
that let trac-all -prep run to completion. cheers, satra On Wed, Feb 5, 2014 at 9:02 PM, Satrajit Ghosh <sa...@mit.edu> wrote: > hi a.y., > > when running trac-preproc i'm getting this error (for dmri_motion and > dmri_group), but it continues running: > > /software/freesurfer/bin/dmri_motion: error while loading shared > libraries: libnetcdf.so.6: cannot open shared object file: No such file or > directory > > what will this fail to do? > > also is libnetcdf now a dependency for freesurfer? the reason i ask is > that i'm running this on a remote cluster for which i don't have admin > privileges. > > cheers, > > satra > >
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