freesurfers, we've acquired fMRI data from [slightly different] slice prescriptions, all partial brain slices. we want to analyze this data all together, but we also want to have the best registration possible [i.e., use bbregister]. what's the best way to do this? here are the ideas we have:
1. analyze these data on the individual subject's surface with selxavg3-sess. the one problem is that we don't see how to pass the registration file for each run. [there are different registrations for distortion-corrected or not] 2. run glms for each run independently and then combine the subject's data together with a FFX analysis. what's the easiest way to run a FFX analysis with fsfast? 3. upsample these functional data to the subject's anatomy [either volume or surface] and then run the analysis there. however, this will take a good chunk of memory and compute time. what's the best thing to do here? thanks in advance, rosa -- 210-325-3185 rlafe...@wellesley.edu
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