Hi Ashley
what format are these in? They don't have an extension

thanks
Bruce
On Wed, 30 Oct 2013, Ashley Hannah wrote:

Here are the tkmedit with overlay images.

Thank you for your help!

Ashley


On Wed, Oct 30, 2013 at 12:40 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu>
wrote:
      It's hard to tell anything from those images. We need to see
      surfaces over volumes in freeview or tkmedit
Cheers
Bruce

On Oct 30, 2013, at 12:01 PM, Ashley Hannah <ahannah1...@gmail.com>
wrote:

      For some reason the images will not display.
Hopefully this works....


On Wed, Oct 30, 2013 at 11:31 AM, Bruce Fischl
<fis...@nmr.mgh.harvard.edu> wrote:
      Hi Ashley

      if you upload a dataset we'll take a look. I am
      surprised to hear that you are having problems. Can
      you post an example image?

      Bruce
      On Wed, 30 Oct 2013, Ashley Hannah wrote:

            Hello, 
            Has anyone processed a SAG FSPGR BRAVO
            sequence successfully through
            FreeSurfer?

            When I run these images the program
            finishes without error however the
            output  in tksurfer is grossly
            incorrect. 

            Is there a way to adjust the parameters
            for reading white and gray matter by
            freesurfer (because BRAVO has a
            different contrast, not as defined) so
            that
            regions and boundaries are parceled
            correctly?

            Thanks, 
            --
            Ashley




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