Does it happen with just one subject? If so, can you upload it? Thanks Bruce
> On Oct 22, 2013, at 5:21 AM, Jürgen Hänggi <j.haen...@psychologie.uzh.ch> > wrote: > > Hi Bruce > > I am running FS 5.3.0 on Mac OSX and both versions > > Lion OX X 10.7 (64b Intel) and > SnowLeopard OS X 10.6 (32b Intel) > > are affected. However, the average surface model looks fine. > > Cheers > Jürgen > >> On [DATE], "Bruce Fischl" <[ADDRESS]> wrote: >> >> what version are you running? >>> On Tue, 22 Oct 2013, J?rgen H?nggi wrote: >>> >>> Dear FS experts >>> >>> When using make_average_subject the resulting volume files (T1.mgz, >>> orig.mgz, brain.mgz, etc.) are cut off superiorly (see attachment). >>> >>> Any idea? >>> >>> Thanks in advance >>> Regards >>> J?rgen >>> >>> ---------------------------------------------------------------------------- >>> J?rgen H?nggi, Ph.D. >>> Division Neuropsychology >>> Institute of Psychology >>> University of Zurich >>> Binzmuehlestrasse 14, PO Box 25 >>> 8050 Zurich, Switzerland >>> 0041 44 635 73 97 (phone office) >>> 0041 76 445 86 84 (phone mobile) >>> 0041 44 635 74 09 (fax office) >>> BIN 4.D.04 (office room number) >>> j.haenggi[at]psychologie.uzh.ch (email) >>> http://www.psychologie.uzh.ch/neuropsy/ (website) >>> http://www.juergenhaenggi.ch (private website) >>> >>> This e-mail (and any attachment/s) contains confidential and/or privileged >>> information. If you are not the intended recipient (or have received this >>> e-mail in error) please notify the sender immediately and destroy this >>> e-mail. Any unauthorised copying, disclosure or distribution of the >>> material in this e-mail is strictly forbidden. >>> ---------------------------------------------------------------------------- >> >> >> The information in this e-mail is intended only for the person to whom it is >> addressed. If you believe this e-mail was sent to you in error and the e-mail >> contains patient information, please contact the Partners Compliance HelpLine >> at >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >> but does not contain patient information, please contact the sender and >> properly >> dispose of the e-mail. > > > ---------------------------------------------------------------------------- > Jürgen Hänggi, Ph.D. > Division Neuropsychology > Institute of Psychology > University of Zurich > Binzmuehlestrasse 14, PO Box 25 > 8050 Zurich, Switzerland > 0041 44 635 73 97 (phone office) > 0041 76 445 86 84 (phone mobile) > 0041 44 635 74 09 (fax office) > BIN 4.D.04 (office room number) > j.haenggi[at]psychologie.uzh.ch (email) > http://www.psychologie.uzh.ch/neuropsy/ (website) > http://www.juergenhaenggi.ch (private website) > > This e-mail (and any attachment/s) contains confidential and/or privileged > information. If you are not the intended recipient (or have received this > e-mail in error) please notify the sender immediately and destroy this > e-mail. Any unauthorised copying, disclosure or distribution of the > material in this e-mail is strictly forbidden. > ---------------------------------------------------------------------------- > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
