you might check on the FSL list. I think I've seen some traffic indicating that there are some tools for doing this. I'l cc Saad as he might know
cheers Bruce On Mon, 2 Sep 2013, Douglas Greve wrote: > Hi Shani, I don't think you can apply a FNIRT transform to a surface. > doug > > > On 9/2/13 8:20 AM, Shani Ben Amitay wrote: > Dear freesurfer people, > Any idea whether I can apply transformation that was calculated by fsl > fnirt on the white/pial surfaces calculated using the freesurfer > stream? > > Thanks! > Shani > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.