Dear Bruce, I try to execute this command to smooth and resample data but I have one message of error:
mri_surf2surf --srcsubject s000_open_brain_sanlm_+TIR_normlalized --srcsurfval curv --src_type curv --trgsubject avg_all_subjects_SD --trgsurfval curv --hemi lh --fwhm-src 15 --trg_type smoothed.source.15 the error is: ERROR: could not determine type of curv thank you for your help, With best regards, Fatma 2013/7/29 Bruce Fischl <fis...@nmr.mgh.harvard.edu> > can you cc the list so that others can answer or see the answer? You need > to specify the source and target subjects with --srcsubject and --trgsubject > > > cheers > Bruce > > > On Mon, 29 Jul 2013, fatma zribi wrote: > > mri_surf2surf --hemi lh --s s000_open_brain_sanlm_+TIR_**normlalized >> --sval curv --src_type curv --fwhm 10 --trg_type curv --tval >> curv.10 >> >> >> 2013/7/29 Bruce Fischl <fis...@nmr.mgh.harvard.edu> >> what is your full command line? You can smooth and map with it (use >> -fwhm-src or fwhm-trg to smooth in either the >> source or target space) >> On Mon, 29 Jul 2013, fatma zribi wrote: >> >> Dear Bruce, >> I have tried mri-surf2surf, it makes the result (smoothed >> curv for example) with the same dimension of >> the subject. But I would >> like a smoothed file with the dimesion of fsaverage. >> >> Thank you for your help. >> >> With best regards, >> >> Fatma >> >> >> 2013/7/29 Bruce Fischl <fis...@nmr.mgh.harvard.edu> >> Hi Fatma >> >> you can use mri_surf2surf within subject I believe, but >> Doug can confirm (although he's traveling >> so it may be a >> bit). You can also do it interactively in tksurfer. >> >> cheers >> Bruce >> >> >> On Mon, 29 Jul 2013, fatma zribi wrote: >> >> Dear Bruce, >> >> Would you mind tell me if there is a function of >> freesurfer that I can use to do the same >> step of >> qcache to smooth and >> interpolate in the fsaverage one subject >> with mri_surf2surf I can smooth only or align one >> subject with an average. >> thank you for you help. >> with best regards, >> Fatma >> >> >> >> >> The information in this e-mail is intended only for the >> person to whom it is >> addressed. If you believe this e-mail was sent to you in >> error and the e-mail >> contains patient information, please contact the Partners >> Compliance HelpLine at >> >> http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. >> If the e-mail was sent to you in error >> but does not contain patient information, please contact the >> sender and properly >> dispose of the e-mail. >> >> >> >> >> >>
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