I guess the solution is -nofill...
2013/7/20 Caspar M. Schwiedrzik <cschwie...@rockefeller.edu>: > Hi Freesurfer Experts, > I am working on a primate anatomy and I am having problems with the > white matter filling in the temporal lobe in version 4.5. > I manually edited wm.mgz and recreated filled.mgz using mri_fill. I > then manually edited filled.mgz. > However, when I then run autorecon-all -autorecon2-wm, all my manual > edits in filled.mgz are overwritten. > Is there a way to autorecon2-wm without mri_fill in v4.5? > Thank you very much, > Caspar _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
