Hi Pedro, about your first question: call the recon-all -long command exactly as you would do the processing, but instead of -all pass -localGI
No idea about 2). Best, Martin On Jun 13, 2013, at 12:02 PM, Pedro Rosa <pedrogomesr...@gmail.com> wrote: > Dear all, > I have two issues: > 1) I would like to run localGI in a longitudinal analysis. I runned the > recon-all, the -base and the -long in all subjects. Then, I tried to run the > -localGI command on .long. directories (I believe this it the directory I > should run the command), the error below returned. How can I solve this > issue? > 2) I tried to download the 5.2 version, but the link does not seem to be > working (ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/). > I tried both Chrome and Firefox. > Regards, > Pedro Rosa. > > ERROR: Are you trying to run or re-run a longitudinal time point? > > If so, please specify the following parameters: > > > > \' -long <tpNid> <templateid> \' > > > > where <tpNid> is the time point id (SAME as cross sectional > > ID) and <templateid> is the ID created in the -base run. > > The directory <tpNid>.long.<templateid> will be created > > automatically or used for output, if it already exists. > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer --------------------------------- Dr. Martin Reuter Assistant in Neuroscience - Massachusetts General Hospital Instructor in Neurology - Harvard Medical School MGH / HMS / MIT A.A.Martinos Center for Biomedical Imaging 149 Thirteenth Street, Suite 2301 Charlestown, MA 02129 Phone: +1-617-724-5652 Email: mreu...@nmr.mgh.harvard.edu reu...@mit.edu Web : http://reuter.mit.edu
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