Hi, Freesurfer Experts
After usual processing with recon-all -all we get the aseg.stats file
with several data including intensity values like:
normMean normStdDev
normMin normMax normRange
Left-Hippocampus 77.8939 7.5748 46.0000
105.0000 59.0000
How could I get similar results for each hippocampal subfield, assuming
I also generated all posterior*.mgz files corresponding to each
subfield?
I guess I should first binarize each of the subfields file with a
threshold=127 to map all the pertinent voxels, and then use these files
as masks over nu.mgz and calculate the intensities values. But I do not
know the best way to accomplish this after the binarize step.
Thank you in advance for any help.
Marcos
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
