Hi Sudhin you need to track down why this happened. First thing to look at is the tal xform Bruce On Tue, 28 May 2013, Sudhin A. Shah wrote:
> > > =============== > *************************WATERSHED************************** > Sorting... > mri_watershed Error: > Problem in the COG calculation: > T1.mgz may not contain properly normalized white-matter. > Confirm that T1.mgz has enough white-matter voxels of value 110. > If white-matter contains few if any voxels of value 110, > try adding wm control-points to nu.mgz, and re-run recon-all. > > Linux sudhin-Precision-WorkStation-690 2.6.35-32-generic #67-Ubuntu SMP Mon > Mar 5 19:39:49 UTC 2012 x86_64 > GNU/Linux > > recon-all -s cbvfB exited with ERRORS at Fri May 17 17:45:23 EDT 2013 > ============== > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
