Thanks so much for your suggestion, Bruce. I will have a try.

Yours Lulu


2013/5/13 Bruce Fischl <fis...@nmr.mgh.harvard.edu>

> try mri_label2vol
>
>
> cheers
> Bruce
> On Mon, 13 May 2013, lujiao luo wrote:
>
>  Hello Bruce,
>> Thanks so much for your reply.
>>
>> Yes, you are right,  I've obtained the  lh.V1.label. But I couldn't
>> figure out how to create a roi.nii.gz mask by using the
>> lhV1.lable file or lhBA.annot, and then I can use it as a seed for my
>> fiber tracking.
>>
>> Yours Lulu.
>>
>>
>>
>> 2013/5/13 Bruce Fischl <fis...@nmr.mgh.harvard.edu>
>>       Hi Lulu
>>
>>       what version are you running? If it's a newer one you should have
>> label files in the label subdir named
>>       [lr]h.V1.label and [lr]h.V1.thresh.label (a thresholded version of
>> the first one).
>>
>>       cheers
>>       Bruce
>>
>>
>>       On Mon, 13 May 2013, lujiao luo wrote:
>>
>>             Hello, experts,
>>             I am trying to obtain a V1 mask and use it as a seed of my
>> fiber tracking. But I do not know how to get
>>             the
>>             BA.nii.gz file, and I've obtained BA.ctab and lh.BA.annot
>> files by using flag recon_all. Would someone
>>             give me
>>             some suggestions about this?
>>
>>             Thanks so much for your  help!
>>
>>             Yours Lulu
>>
>>
>>
>>
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