Katie,

The next release, v5.3 (hopefully next week), will fix a problem with
running on Ubuntu 13, but freesurfer works on Ubuntu 12 as well (with one
modification described on our download page).

So there are no reasons not to pick Ubuntu other than who will maintain
it.  If its just one machine, Ubuntu is easy to install.  For
administrators, from what i understand, CenttOS is easier to admin. 
Either is fine for freesurfer.

Nick


> Dear all,
>
> I know you run Centos at the Martinos center.  Are there any known issues
> or concerns that differentiate between running Freesurfer on Centos or
> Ubuntu?  Reasons to prefer one or the other?
>
> Thanks for your help,
> Katie Surrence
>
> --
> Research Coordinator
> Social Cognition Laboratory
> New York State Psychiatric Institute
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