Thanks Doug,
The command line I am running is:
mri_cor2label --c
/cluster/ablood/1/${experimental_directory}/${recons_directory}/${identifier}_recon/mri/aseg.mgz
--id 1029 --l
/cluster/ablood/1/${experimental_directory}/${recons_directory}/${identifier}_recon/label/suppar_ctx_LH_${identifier}.label
This yields the following error: ERROR: id=1029, must be 0<id<255
In this same script I ran ID numbers for regions <255 on the same
subjects, and the labels were created correctly.
Is there something about my command line structure that's limiting my
options?
Thanks!
Jeff
> Hi Jeff, are you sure that mri_cor2label does not take ids > 255? I just
> ran it without a problem.
> doug
>
>
>
> On 05/03/2013 11:30 AM, jwa...@nmr.mgh.harvard.edu wrote:
>> Hello Freesurfers,
>> I would like to use mri_cor2label for areas of the cortext defined
>> in
>> the FreeSurferColorLUT.txt. There are many ROIs whose IDs are >255,
>> the numerical limit imposed on mri_cor2label. How can I define labels
>> using these larger-numbered ROIs? I am specifically interested in
>> using LUT IDs such as 1024 and 2024, the L and R precentral gyrus
>> segmentation.
>>
>> Thank you!
>>
>> Jeff
>> _______________________________________________
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>>
>>
>
> --
> Douglas N. Greve, Ph.D.
> MGH-NMR Center
> gr...@nmr.mgh.harvard.edu
> Phone Number: 617-724-2358
> Fax: 617-726-7422
>
> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
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>
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