Hello,

I was trying to run mri_glmfit-sim at a lower cwpvalthresh so I specified the --no-sim option to avoid re-running the entire simulation again. I entered my DSC file but in the end I get the error message: "cannot find any csd files". Here is what I entered:

mri_glmfit-sim \
--glmdir GLMFIT/LH_1GroupAvg_ModVAS_nuissanceAGE_DOSS \
--cwpvalthresh .999 \
--no-sim GLMFIT/LH_1GroupAvg_ModVAS_nuissanceAGE_DOSS/csd/mc-z.abs.3.j001-1GroupAvg-Cor-thickness-Mod-VAS.csd

I copied and pasted the csd file from its own folder to the top directory, but it gave the same error. I've attached the error log in case you want to have a look. 

Thanks for your help!

Jeni



Attachment: mc-z.abs.3.j001-1GroupAvg-Cor-thickness-Mod-VAS.csd.mri_glmfit-sim.log
Description: Binary data

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to