Hi Anupa- you can use tkmedit with -overlay flag shantanu On Sat, April 20, 2013 10:56 pm, Anupa AV wrote: > Ok... > I mean overlaying the label to T1W image > > > ________________________________ > Fm: Bruce Fischl <fis...@nmr.mgh.harvard.edu> > To: Anupa AV <av.an...@yahoo.com> > Cc: Freesurfer <freesurfer@nmr.mgh.harvard.edu> > Sent: Sunday, April 21, 2013 8:09 AM > Subject: Re: [Freesurfer] Merging the labels to T1 image > > > > Sorry, I still don't understand. What do you mean by "merge"? > > > > > On Apr 20, 2013, at 10:37 PM, Anupa AV <av.an...@yahoo.com> wrote: > > > Dear Bruce, >> >> >>Sorry and to be more precise... >>After creating a label, say DLPFC, I want to merge it on the subject's T1 >> sagittal section. >>I'd like to know whether that's possible with FS? >> >> >> >>________________________________ >> From: Bruce Fischl <fis...@nmr.mgh.harvard.edu> >>To: Anupa AV <av.an...@yahoo.com> >>Cc: Freesurfer <freesurfer@nmr.mgh.harvard.edu> >>Sent: Saturday, April 20, 2013 7:25 PM >>Subject: Re: [Freesurfer] Merging the labels to T1 image >> >> >>Hi Anupa >> >>I'm not sure what you mean, but mri_label2vol might do what you want >> >>cheers >>Bruce >>On Fri, >>19 Apr 2013, Anupa AV wrote: >> >>> Dear FS experts, >>> Is it possible to merge the label obtained from tksurfer to T1 weighted >>> image? >>> >>> If yes, which method I should follow? >>> >>> >>_______________________________________________ >>Freesurfer mailing list >>Freesurfer@nmr.mgh.harvard.edu >>https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> >> >>The information in this e-mail is intended only for the person to whom it >> is >>addressed. If you believe this e-mail was sent to you in error and the >> e-mail >>contains patient information, please contact the Partners Compliance >> HelpLine > at >>http://www.partners.org/complianceline . If the e-mail was sent to you in >> error >>but does not contain patient information, please contact the sender and >> properly >>dispose of the e-mail. >> >> >> >>_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Shantanu Ghosh, Ph.D. Harvard Medical School & Massachusetts General Hospital Martinos Center for Biomedical Imaging _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
