Hi, On Wed, April 17, 2013 10:27 am, Bruce Fischl wrote: > Hi Sophie > > the surface has to be a spherical one. Internally it will use the geometry > for some other surfaces like smoothwm, but the command line has to be a > spherical surfaces. Usually the first time with an individual subject you > can use sphere, but if you are using multiple ones it should be > sphere.reg. > > I'll cc the list so that others who are interested can see the response. > > cheers > Bruce > > On Wed, 17 Apr > 2013, Sophie Maingault wrote: > >> But it is not really from scratch ? >> >> Because I run >> mris_make_template ?h smoothwm sujet0 mytemp0.tif (one reference >> subject) >> mris_make_template ?h sphere sujet0 mytemp0.tif (one reference subject) >> >> >> mris_register -curv ?h.sphere mytemp0.tif ?h.sphere.myreg0 (for all the >> subjects that I want to use in order to create my template) >> >> Then If i do : mris_make_template ?h sphere.myreg0 mytemp1.tif
Won't this be: mris_register -curv ?h.sphere mytemp0.tif ?h.sphere.reg ? >> >> mytemp1.tif will represent corresponding points across subjects ? >> >> Sophie >> >> Le 17/04/13 15:42, « Bruce Fischl » <fis...@nmr.mgh.harvard.edu> a écrit >> : >> >>> Hi Sophie, >>> >>> if you want the template to represent corresponding points across your >>> subjects you need to use sphere.reg >>> >>> cheers >>> Bruce >>> On Wed, 17 Apr 2013, Sophie Maingault >>> wrote: >>> >>>> Hi Experts, >>>> >>>> I'm creating a template from scratch. When I run mris_make_template is >>>> it enough to >>>> run mris_make_template ?h smoothwm <subjid> my.temp0.tif ? My question >>>> is about which >>>> sphere_name I have to put for argument ? I hope I was clear. >>>> >>>> Best regards. >>>> >>>> Sophie >>>> >>>> >>> >>> >>> The information in this e-mail is intended only for the person to whom >>> it >>> is >>> addressed. If you believe this e-mail was sent to you in error and the >>> e-mail >>> contains patient information, please contact the Partners Compliance >>> HelpLine at >>> http://www.partners.org/complianceline . If the e-mail was sent to you >>> in >>> error >>> but does not contain patient information, please contact the sender and >>> properly >>> dispose of the e-mail. >> >> >> >> >>_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Shantanu Ghosh, Ph.D. Harvard Medical School & Massachusetts General Hospital Martinos Center for Biomedical Imaging _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
