Thanks so much for the improvement! I ran the new mris_make_surfaces and the pial surfaces look much better in FS 5.2!
Here is the comparison slice if you're interested. https://yalesurvey.qualtrics.com/SE/?SID=SV_ddwW7I9yMQuCtPn Best, Daniel -- Yung-Jui "Daniel" Yang, PhD Postdoctoral Researcher Yale Child Study Center New Haven, CT (203) 737-5454 > >Date: Sat, 13 Apr 2013 22:36:32 -0400 (EDT) >From: Bruce Fischl <fis...@nmr.mgh.harvard.edu> >Subject: [Freesurfer] 5.2 pial surfaces >To: freesurfer@nmr.mgh.harvard.edu > > >Hi All > >we've tracked down the problem with 5.2 pial surfaces that affects some >types of acquisitions. We will be testing the fixed version this week and >hope to release a corrected mris_make_surfaces in the near future. You >should just be able to rerun autorecon2 I believe to update your surfaces >and not the whole recon pipeline, but we'll make a more detailed >announcement when we are ready with it. Anyone who has had problems with >the 5.2 pial surfaces (or anyone else for that matter) is welcome to try >it >out. Just let us know your hardware/software environment and we'll send >you >a version. > >Sorry for the problems. > >cheers >Bruce > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
