Mike, We dont have a RHEL 5.9 system to replicate the issue. However, I did find a bug in qdec where the 'Min' value in the Threshold settings would not update the display when a value was entered. This bug was introduced when the 'Mid' value was removed (which is why I think the v5.1 qdec works).
A fixed version of qdec.bin for linux is available here: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/linux-centos4_x86_64/ Nick On Fri, 2013-04-12 at 12:20 -0500, Michael Harms wrote: > > > I just transferred all the data to a different system running CentOS > 5.5 and I'm able to set the display thresholds in qdec on that > system. It also uses a different FS version (5.1) but I think it is > an OS issue, and not a FS version issue, since I have the same problem > on the original RHEL 5.9 system using the qdec in FS 5.1 as well. > > > So, must be something about the libraries qdec uses not quite playing > nice in RHEL 5.9 ? > > > thanks, > -MH > > > -- > Michael Harms, Ph.D. > ----------------------------------------------------------- > Conte Center for the Neuroscience of Mental Disorders > Washington University School of Medicine > Department of Psychiatry, Box 8134 > 660 South Euclid Ave. Tel: 314-747-6173 > St. Louis, MO 63110 Email: mha...@wustl.edu > > > From: Michael Harms <mha...@conte.wustl.edu> > Date: Friday, April 12, 2013 11:32 AM > To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu> > Subject: [Freesurfer] setting thresholds in qdec > > > > > > Hello, > Is it no longer possible to set the Min, Mid, and Max thresholds > directly on the Qdec display tab? > The only way I seem to be able to change them is via the sliders in > the histogram at the bottom, which I don't recall previously being the > case. > This is Qdec 1.4 (FS 5.2) on a RHEL 5.9 system using > freesurfer-Linux-centos4_x86_64-stable-pub-v5.2.0 distribution. > > > I can't change the FDR "Rate" either. > > > thanks, > -MH > > > -- > Michael Harms, Ph.D. > ----------------------------------------------------------- > Conte Center for the Neuroscience of Mental Disorders > Washington University School of Medicine > Department of Psychiatry, Box 8134 > 660 South Euclid Ave. Tel: 314-747-6173 > St. Louis, MO 63110 Email: mha...@wustl.edu > _______________________________________________ Freesurfer mailing > list Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The > information in this e-mail is intended only for the person to whom it > is addressed. If you believe this e-mail was sent to you in error and > the e-mail contains patient information, please contact the Partners > Compliance HelpLine at http://www.partners.org/complianceline . If the > e-mail was sent to you in error but does not contain patient > information, please contact the sender and properly dispose of the > e-mail. > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
