Hi Xiang-zhen, mri_glmfit does not read the FSF_OUTPUT_FORMAT. Instead, control the output format with --nii.gz doug
On 04/12/2013 07:58 AM, Xiangzhen Kong wrote: > Hi, all. > I have come across a problem when using mri_glmfit. > We know that the output format is controlled by the $FSF_OUTPUT_FORMAT. > I have checked that in my environment, $FSF_OUTPUT_FORMAT is nii.gz. > But the output fils are all in mgh format. > How can I get output files in nii.gz? > Thanks! > Xiang-zhen > ------------------------------------------------------------------------ > 【小孔成像】http://www.conxz.net > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
