Hi Jon, I don't know how to make this work, but I'm sure that those commands will not do it. Sorry:( doug
On 4/10/13 1:13 PM, Jon Wieser wrote: > we captured some dti data. there were 2 runs. we acquired in the axial plane, > 2mm slice thickness the first run captured the lower half of the brain, slice > locations: I56-S20, and the second run captured the upper half of the brain > S16-S92. i have made briks from each of these runs. > I can convert the briks to nifti files > I want to merge the nifti files together to analyze the data in tracula > > In the past i have merged data from two dti runs, but each run have covered > the entire brain, with the following commands > > mri_convert MJ0001dti1+orig.BRIK MJ0001dti1.nii.gz > mri_convert MJ0001dti2+orig.BRIK MJ0001dti2.nii.gz > mri_concat --i MJ0001dti1.nii.gz MJ0001dti2.nii.gz --o MJ0001dti12.nii.gz > > > would it work to concat the two half brain niftis into one file and analyze > that with tracula? > (I will concat the bvec and bvals files too) > would this cause problems doing it this way? > Thanks > Jon > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
