Thanks Doug, this makes sense. What about retinotopic mapping? Should I use fsaverage or self?
-Yuhong On Tue, Mar 26, 2013 at 10:56 AM, Douglas N Greve <gr...@nmr.mgh.harvard.edu > wrote: > > It should either be fsaverage, or self, or an average subject you have > created. The fMRI analysis is done such that the raw data are resampled > into the fsaverage space (unless you use self) and processed there in > anticipation of doing group analysis. > doug > > > On 03/26/2013 10:37 AM, Y.V. Jiang wrote: > > Hi, > > > > I wonder if you could help with a basic question for preproc-sess in > > Version 5.2.0. > > > > The flag "-surface subject hemi": what should be the entry to > > "subject?" The tutorial says fsaverage, but for first-level analysis, > > should it match subjectname? Or should it always be fsaverage? > > > > If it needs to match subjectname, then this command cannot be run in a > > batch (because different subjects have different input to that line), > > is that true? > > > > Thank you. > > > > -Yuhong > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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