I'm sorry but, what's meaning "ldd kvlApplyTransform"? What's I should do more simply? Stefano
----Messaggio originale---- Da: k...@nmr.mgh.harvard.edu Data: 22-mar-2013 18.22 A: <std...@virgilio.it> Cc: <freesurfer@nmr.mgh.harvard.edu> Ogg: Re: [Freesurfer] hippo subfield Hi Stefano, Can you do "ldd kvlApplyTransform" and send us the result? Koen On 3/22/13, std...@virgilio.it <std...@virgilio.it Hippocampal Subfields > processing Fri Mar 22 16:56:31 CET 2013\n mkdir -p > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/tmp/subfieldResults\n > kvlSegmentHippocampalSubfields.sh Diff02 left > /Applications/freesurfer/subjects/subject_prova/Diff02 > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/tmp/subfieldResults > \nDoing left sidemeshFileName: > /Applications/freesurfer/data/GEMS/CurrentMeshCollection30.gzcompressionLookupTableFileName: > /Applications/freesurfer/data/GEMS/compressionLookupTable_left.txtboundingBoxFileName: > /Applications/freesurfer/data/GEMS/imageDump.mgzsubjectName: Diff02side: > leftinputDirectory: > /Applications/freesurfer/subjects/subject_prova/Diff02outputDirectory: > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/tmp/subfieldResultsdirectory > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/tmp/subfieldResults/Diff02 > already existsdirectory > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/tmp/subfieldResults/Diff02/left > already existscd > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/tmp/subfieldResults/Diff02/leftcp > -f /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/mri/nu.mgz > .cp -f > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/mri/aseg.mgz > .cp -f > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/mri/transforms/talairach.xfm > .cp /Applications/freesurfer/data/GEMS/imageDump.mgz .kvlApplyTransform > imageDump.mgz -0.9991 -0.0328 0.0258 144.0010 -0.0330 0.9994 -0.0086 2.6560 > 0.0255 0.0094 0.9996 -3.1939dyld: Library not loaded: > libITKCommon.3.16.dylib Referenced from: > /Applications/freesurfer/bin/kvlApplyTransform Reason: image not > found/Applications/freesurfer/bin/kvlSegmentHippocampalSubfields.sh: line > 18: 77530 Trace/BPT trap: 5 kvlApplyTransform imageDump.mgz -0.9991 > -0.0328 0.0258 144.0010 -0.0330 0.9994 -0.0086 2.6560 0.0255 0.0094 0.9996 > -3.1939failed to do kvlApplyTransform imageDump.mgz > -0.9991 -0.0328 0.0258 144.0010 > -0.0330 0.9994 -0.0086 2.6560 0.0255 > 0.0094 0.9996 -3.1939Darwin iMac-di-Stefano.local 12.3.0 Darwin > Kernel Version 12.3.0: Sun Jan 6 22:37:10 PST 2013; > root:xnu-2050.22.13~1/RELEASE_X86_64 x86_64 > recon-all -s Diff02 exited with ERRORS at Fri Mar 22 16:56:31 CET 2013 > For more details, see the log file > /Applications/freesurfer/subjects/subject_prova/Diff02/Diff02/scripts/recon-all.logTo > report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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