Hello all, I am starting to run some analysis using fs-fast and I had a few basic questions that I couldn't find answers on the wiki/tutorial.
1) Format of files for mkanalysis-sess -tpexclude tpexclude.dat What is the format of the input file for -tpexclude? Is it simply a single column of integers representing the seconds that need to be excluded? My example, my TR is 3 and I know I want to remove acquisitions 134 and 140 because of motion. Do I simply need to have a file that has the following content? 402 403 404 420 421 422 2) bold data - Resampling to "common space" In the preprocessing step, the bold data is resampled to 76x76x93. My data is 96x96x50. Does starting with data that is larger than the "common space" cause a problem in the analysis? 3) Viewing analysis for individual bold data runs When the First level analysis is completed, the resulting files are a combination of all of the bold data runs of the session. Is there a way to make it so that I can also see the different activity for individual runs within the session or does the analysis only do it by combining data for all runs within a session? Thanks in advance! -Ronny _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
