Hi Linn,
did you ever solve this?
you need to specify a name for the base and the tp1id and tp2id are
placeholders for the id's of the corresponding 2 cross sectional time
points. Don't typ;e the '...'
So for example:
recon-all -base linn-base -tp linn1 -tp linn2 -all
linn1 and linn2 should be there already and contain the results from the
first step, the independent processing. After this you should see also
the directory linn-base.
Best, Martin
On 02/01/2013 09:02 AM, Linn Mittlestein wrote:
Dear Freesurfer experts,
I just tried creating the -base for longitudinal processing on two
time points using
recon-all -base <templateID> -tp <tp1id> -tp <tp2id> ... -all
After doing this, I received no error messages and a third folder named after
the template name I had given
it it was present in the subjects directory, however all of these files were
empty. What have I done
wrong?
Regards
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--
Dr. Martin Reuter
Assistant in Neuroscience - Massachusetts General Hospital
Instructor in Neurology - Harvard Medical School
MGH / HMS / MIT
A.A.Martinos Center for Biomedical Imaging
149 Thirteenth Street, Suite 2301
Charlestown, MA 02129
Phone: +1-617-724-5652
Email:
mreu...@nmr.mgh.harvard.edu
reu...@mit.edu
Web : http://reuter.mit.edu
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