Hi Efrat Does it look ok in tkmedit or freeview? Cheers Bruce
On Feb 19, 2013, at 6:05 AM, Efrat Kliper <e.kli...@gmail.com> wrote: > Dear freesurfer expert, > > We have preformed the full autorecon command using freesurfer and want to > view the results in Slicer, > When we load the pial surface onto slicer it doesn't seem to be coregister to > the original MR image, > how can we bring back the surface to the original native space or > alternatively, how can we preforme the transformation on the original MRI so > it will fit the surface that we gut. > We found in the wiki a way to do that with volumes (mri_vol2vol --mov > brain.mgz --targ rawavg.mgz --regheader --o brain-in-rawavg.mgz) but what > about surface? > We have also found the command mri_surf2surf, but not sure how to use it > because we don't have surface in the native space? > > thank you in advance > Efrat > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
