Hi Josh catastrophic subcortical failures are pretty rare. What kind do you mean? You will need to diagnose the cause before figuring out how to fix it. I'm happy to take a look if you upload it
cheers Bruce On Tue, 5 Feb 2013, Joshua Lee wrote: > Hi All, > > I'm just wondering what kind of protocol people are using to address > the situation when Freesurfer has a catastrophic failure in accurately > segmenting the sub-cortical structures. While manual editing is an > option, are there upstream changes that might improve the subcortical > segmentation is re-run (e.g. wm control points?). Drop them? If > conducting an analysis of Freesurfer subcortical segmentation in some > population, how have people handled these cases? > > Thanks, > > Josh > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
