as long as the direction cosines are correct (which they will be if you start with the dicoms from the scanner) you should be fine
Bruce On Thu, 31 Jan 2013, Anders Hougaard wrote: > Dear Freesurfers, > > Do the anatomical input images to recon-all have to be in the same > orientation (neurological/radiological) or is it ok as long as the > orientation labels are correct? > > All the best, > Anders > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.