Hi Mia, try looking at the lh.orig.nofix surface. There may be a huge defect (like the entire cerebellum is attached). You can run
tkmedit MG58_SurferOutput_postop orig.mgz lh.orig.nofix Note that you will get a few error messages when loading the orig.nofix surface. These can be ignored doug On 01/23/2013 12:19 PM, Borzello, Mia wrote: > Hey Freesurfers, > > I received a "Cannot allocate memory" error while running a recon overnight. > I think there should be enough space on the machine to store the data so I'm > suspicious that it's a different memory problem. > I attached the recon-all.log file. > > Thanks for your help! > m > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
