Hi Satra, I don't think we've ever compiled such a thing. Maybe just run recon-all and then ls -lR :) doug
On 01/05/2013 02:48 PM, Satrajit Ghosh wrote: > hi folks, > > happy new year. > > we are trying to create an object model for the freesurfer directory. > > is there a function/script in freesurfer that would return me > effectively something `ls -lR` but only the items that are mandatory > for a subjects' directory? > > if not, is there a document that lists the relevant outputs along the > lines of something like this: > > http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FEAT/UserGuide#FEAT_Output > > and if anybody is interested, here is our work in progress in > cataloging freesurfer directory structure and stats (coming soon) in > the w3c-prov model format. > > http://nbviewer.ipython.org/urls/dl.dropbox.com/s/1ssv4i1dyraa46h/freesurfer_catalog.ipynb > > (the link doesn't have versioning yet - but will keep changing as we > work on it) > > cheers, > > satra > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
