this is a bug in the topology fixer. Maybe Zeke or Nick can post a new
version of it? Was it mris_topo_fixer that was runing or
mris_fix_topology?
On Fri, 16 Nov 2012, Hugh Pemberton wrote:
Hi Bruce,
Thanks for getting back to me. In terminal window it says
"freesurfer-Linux-centos4_x86_64-stable-pub-v5.1.0" but recon-all -version
give me "$Id: recon-all,v 1.379.2.17 2011/05/20 22:48:18 nicks Exp $"
Hugh
On 16 November 2012 11:05, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote:
Hi Hugh
This is fixed in the newest version. What version are you running?
Bruce
On Nov 15, 2012, at 6:48 PM, Hugh Pemberton <hughpembert...@gmail.com>
wrote:
Hi,
I have just received this error after a recon-all subjid- ___
all :
ERROR: _FindFacePath: could not find path!
/home/hughp/freesurfer/subjects/B______________/scripts
mris_remove_intersection ../surf/lh.orig ../surf/lh.orig
intersection removal took 0.00 hours
removing intersecting faces
writing corrected surface to ../surf/lh.orig
rm ../surf/lh.inflated
cp ../surf/lh.orig_corrected ../surf/lh.orig
Linux naoshi-WS 3.2.0-32-generic #51-Ubuntu SMP Wed Sep 26
21:33:09 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s B______________ exited with ERRORS at Thu Nov 15
11:40:44 EST 2012
To report a problem, see
http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
Many thanks in advance,
Best,
Hugh
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