thanks! cheers
2012/10/24 Bruce Fischl <fis...@nmr.mgh.harvard.edu> > look in the recon-all -help output > > On Wed, 24 Oct 2012, pietro de rossi wrote: > > ok, >> how do I get a list of all the commands after mrsi_make_surface? >> >> 2012/10/24 Bruce Fischl <fis...@nmr.mgh.harvard.edu> >> Hi Pietro, >> >> I don't think we've setup a pipeline for that yet. You'll need >> to rerun the individual commands after mris_make_surfaces >> (including mris_thickness to regenerate the thickness maps) >> >> cheers >> Bruce >> >> >> On Wed, 24 Oct 2012, pietro de rossi wrote: >> >> Hi FreeSurfer people, >> I'm considering editing through direct repositioning in >> freeview (under >> tools->reposition surface) for some scans. >> >> After that, do I need to rerun everything through the >> whole recon-all >> pipeline? What would be the command line for that? >> >> Thank you very much, >> >> Pietro >> >> -- >> Pietro De Rossi, MD >> ------------------------------**------- >> Sapienza Università di Roma, Facoltà di Medicina e >> Psicologia, Dipartimento >> NESMOS (Neuroscienze, Salute Mentale, Organi di Senso), >> Ospedale >> Sant'Andrea, Via di Grottarossa 1035-1039, 00189 Roma >> >> NESMOS Department (Neurosciences, Mental Health and >> Sensory Functions), >> School of Medicine and Psychology, Sapienza University, >> Sant?Andrea Hospital, >> Via di Grottarossa 1035-1039, 00189 Rome, Italy >> >> Neurobehavioral Clinical Research Section, Social and Behavioral >> Research >> Branch, National Human Genome Research Institute (NHGRI), >> National >> Institutes of Health (NIH), Bethesda, Maryland 20892, USA >> >> >> >> >> The information in this e-mail is intended only for the person to whom >> it is >> addressed. If you believe this e-mail was sent to you in error and the >> e-mail >> contains patient information, please contact the Partners Compliance >> HelpLine at >> http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. >> If the e-mail was sent to you >> in error >> but does not contain patient information, please contact the sender >> and properly >> dispose of the e-mail. >> >> >> >> >> -- >> Pietro De Rossi, MD >> ------------------------------**------- >> Sapienza Università di Roma, Facoltà di Medicina e Psicologia, >> Dipartimento >> NESMOS (Neuroscienze, Salute Mentale, Organi di Senso), Ospedale >> Sant'Andrea, Via di Grottarossa 1035-1039, 00189 Roma >> >> NESMOS Department (Neurosciences, Mental Health and Sensory Functions), >> School of Medicine and Psychology, Sapienza University, Sant?Andrea >> Hospital, >> Via di Grottarossa 1035-1039, 00189 Rome, Italy >> >> Neurobehavioral Clinical Research Section, Social and Behavioral Research >> Branch, National Human Genome Research Institute (NHGRI), National >> Institutes of Health (NIH), Bethesda, Maryland 20892, USA >> >> -- Pietro De Rossi, MD ------------------------------------- Sapienza Università di Roma, Facoltà di Medicina e Psicologia, Dipartimento NESMOS (Neuroscienze, Salute Mentale, Organi di Senso), Ospedale Sant'Andrea, Via di Grottarossa 1035-1039, 00189 Roma NESMOS Department (Neurosciences, Mental Health and Sensory Functions), School of Medicine and Psychology, Sapienza University, Sant’Andrea Hospital, Via di Grottarossa 1035-1039, 00189 Rome, Italy Neurobehavioral Clinical Research Section, Social and Behavioral Research Branch, National Human Genome Research Institute (NHGRI), National Institutes of Health (NIH), Bethesda, Maryland 20892, USA
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