Thank you for your answer. I'm not sure I understand your question right, but I just processed the file using following procedures. 1. recon-all -autorecon1 -nuintensitycor-3T (because mine was 3T) 2. skullstripping brain mask using gcuts 3. adding control points (only on the left hemisphere) 4. recon-all -autorecon2-cp and this figure was made by a commnad line, [tkmedit wm.mgz -aux brain.mgz -surfs]. Best, EK.
2012/10/10 Bruce Fischl <fis...@nmr.mgh.harvard.edu> > what was the name of the file that you transferred? > > On Wed, 10 Oct 2012, EK Kim wrote: > > I already uploaded this problem 2 days ago, reprocessing the subject to >> make >> sure about control points. >> However when I added the control points to the left hemisphere, >> the right hemisphere surface was changed severely. >> I used the command line, recon-all -autorecon2-cp -s subjectID. >> Could you tell me why does it occur and how to deal with it? >> >> >> Best, >> >> EK >> >> >> > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/**complianceline<http://www.partners.org/complianceline>. > If the e-mail was sent to you in error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. >
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
