After you ran -autorecon2-wm you skipped a couple of the autorecon3 steps (-pial, -surfvolume, -segstats).
On Tue, 14 Aug 2012, Douglas N Greve wrote: > It means that your subject is out of synch. This usually happens when > you've edited a subject and re-run recon-all, but the re-run did not get > far enough either because it failed for some reason or you did not run > it all the way through to the end. You can run > > recon-all -s subject -make all > > and it will update your subject and get it back in synch > > doug > > On 08/14/2012 01:22 PM, Alfredo Damasceno wrote: >> Dear Freesurfers, >> >> I've got twice the following error message while pre-smoothing images >> for qdec (recon-all -qcache): >> >> Reading curvature file /home/alfredo/subjects/vbmRCCT/surf/rh.volume >> ERROR: number of vertices in >> /home/alfredo/subjects/vbmRCCT/surf/rh.volume does not match surface >> (128252,128150) >> ERROR: reading curvature file >> Linux tupi.neuroimg.hc.unicamp.br 2.6.35.14-100.fc14.x86_64 #1 SMP Fri >> Oct 21 18:40:08 UTC 2011 x86_64 x86_64 x86_64 GNU/Linux >> >> recon-all -s vbmRCCT exited with ERRORS at Fri Aug 10 16:06:59 BRT 2012 >> >> I am using a Linux-centos4_x86_64 and freesurfer version is 5.1 >> my SUBJECTS_DIR is /home/alfredo/subjects >> >> >> Attached is the log.file >> >> Thanks >> Alfredo >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
