And there is nothing in /Applications/freesurfer/bin? Are there any files in 
the other directories? Do you have permission to install it in that location? 
If nothing is in the bin dir, then there is no need to try recon-all, it will 
always fail.
doug



On 07/31/2012 04:05 PM, Fidel Vila wrote:
> Hi Doug,
>
> I re-installed freesurfer, and I still get the same error message 
> (terminal output attached); bin files are still missing from bin folder.
>
> Shall I report this as a bug?
>
> Regards,
>
> Fidel
>
>
>
>
> On 25-Jul-12, at 8:22 PM, Douglas Greve wrote:
>
>> did you set up your environment so that your path environment 
>> variable has all the proper paths in it? Look at the wiki for 
>> instructions.
>> doug
>>
>> On 7/25/12 7:57 PM, Fidel Vila wrote:
>>> Hi Freesurfer experts,
>>>
>>> I recently installed FS (PowerPC architecture version available on 
>>> FS website) on a Mac OS X 10.4.11 and I get the attached output 
>>> error when running recon-all.
>>>
>>> Advice on how to troubleshoot this would be appreciate.
>>>
>>> Thanks,
>>>
>>> Fidel
>>>
>>>
>>>
>>> _______________________________________________
>>> Freesurfer mailing list
>>> Freesurfer@nmr.mgh.harvard.edu
>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>>
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>> whom it is
>> addressed. If you believe this e-mail was sent to you in error and 
>> the e-mail
>> contains patient information, please contact the Partners Compliance 
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>

-- 
Douglas N. Greve, Ph.D.
MGH-NMR Center
gr...@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html

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