It does not seem like it should take that much time. You might try this program ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_mcsim.linux
This is what I use to create the cached results that we distribute. You can use the cached results unless you have a different mask. If you use mri_mcsim, there will be a few extra steps (not just a replacement for mri_glmfit-sim). Let me know if you get that far. doug On 07/11/2012 06:50 AM, Ed Gronenschild wrote: > Hi, > > I'm performing a clusterwise correction for multiple comparisons > with the command > > mri_glmfit-sim --glmdir my_glmdir --sim mc-z 5000 1.3 basename \ > --sim-sign abs > > For version v4.5.0 this took about 40 hours to complete. > However, for v5.1.0 it is now running for more than > 6 days and from the csd file I can read that it still has more > than 1000 steps to go. Is it possible that it takes that > much time? > > Cheers, > Ed > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
