Hi, I'm using mri_label2label to reverse normalize labels from fsaverage space to the native surface.
I'm ending up with some splotchy-looking labels, for lack of a better word. See what I mean here: http://web.mit.edu/mwaskom/www/splotchy.png I'm doing this normalization in a script with the following relevant line, which seems to be what happens inthe BAlabes step of recon-all mri_label2label --srclabel ../fsaverage/label/${hemi}.${roi}.label \ --srcsubject fsaverage --trgsubject ${subj} \ --trglabel label/$hemi.${roi}.label \ --regmethod surface --hemi $hemi Any idea how I can avoid this splotchiness or, failing that, do a closing on the label to clean up some of the noise? Cheers, Michael _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
